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  5. LOC_Os05g31056.1

LOC_Os05g31056.1 (TPR16, LOC_Os05g31056)


Aliases : TPR16, LOC_Os05g31056

Description : no hits & (original description: none)


Gene families : OG0001935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g31056.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00201040 TPR16,... DnaJ protein P58IPK homolog OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT5G12430 TPR16 Heat shock protein DnaJ with tetratricopeptide repeat 0.06 OrthoFinder output from all 47 species
Adi_g069297 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087219 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12835 TPR16 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene51539.t1 TPR16, Aspi01Gene51539 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12352 TPR16 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02947 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01005044001 TPR16 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_07120 TPR16 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g05014 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35893 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60924 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010692 TPR16 not classified & original description: CDS=84-4754 0.03 OrthoFinder output from all 47 species
Sam_g36194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g016410.3.1 TPR16, Solyc04g016410 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Spa_g30890 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026765_P001 Zm00001e026765 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e031378_P001 TPR16, Zm00001e031378 TPR repeat-containing thioredoxin TTL2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!