- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os05g28560
Description : no hits & (original description: none)
Gene families : OG0001023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g28560.1 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g06200.1 | LOC_Os01g06200 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g15190.1 | LOC_Os01g15190 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os01g41500.1 | LOC_Os01g41500 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os02g18200.1 | LOC_Os02g18200 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g25140.1 | LOC_Os02g25140 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g25440.1 | LOC_Os02g25440 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os02g27630.1 | LOC_Os02g27630 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os02g49890.1 | LOC_Os02g49890 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os03g03220.1 | LOC_Os03g03220 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g04790.1 | LOC_Os03g04790 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g31640.1 | LOC_Os03g31640 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os03g33290.1 | LOC_Os03g33290 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g36120.1 | LOC_Os03g36120 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g01190.1 | LOC_Os04g01190 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g02200.1 | LOC_Os04g02200 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g06600.1 | LOC_Os04g06600 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g14870.1 | LOC_Os04g14870 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os04g17720.1 | LOC_Os04g17720 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g19910.1 | LOC_Os04g19910 | no hits & (original description: none) | 0.19 | OrthoFinder output from all 47 species | |
| LOC_Os04g21380.1 | LOC_Os04g21380 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g23780.1 | LOC_Os04g23780 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g28900.1 | LOC_Os04g28900 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g43480.1 | LOC_Os04g43480 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os05g17040.1 | LOC_Os05g17040 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g17970.1 | LOC_Os05g17970 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g18910.1 | LOC_Os05g18910 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g23280.1 | LOC_Os05g23280 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g24840.1 | LOC_Os05g24840 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g24950.1 | LOC_Os05g24950 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g32040.1 | LOC_Os05g32040 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g23080.1 | LOC_Os06g23080 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os06g25630.1 | LOC_Os06g25630 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g33300.1 | LOC_Os06g33300 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g35380.1 | LOC_Os06g35380 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g36140.1 | LOC_Os06g36140 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g37520.1 | LOC_Os06g37520 | no hits & (original description: none) | 0.16 | OrthoFinder output from all 47 species | |
| LOC_Os07g11230.1 | LOC_Os07g11230 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g14970.1 | LOC_Os07g14970 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g18200.1 | LOC_Os07g18200 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os07g20690.1 | LOC_Os07g20690 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g27690.1 | LOC_Os07g27690 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os08g03210.1 | LOC_Os08g03210 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os08g07230.1 | LOC_Os08g07230 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os08g13500.1 | LOC_Os08g13500 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os08g13560.1 | LOC_Os08g13560 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os08g19460.1 | LOC_Os08g19460 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os08g22630.1 | LOC_Os08g22630 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g23990.1 | LOC_Os08g23990 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os09g01350.1 | LOC_Os09g01350 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g04540.1 | LOC_Os09g04540 | no hits & (original description: none) | 0.16 | OrthoFinder output from all 47 species | |
| LOC_Os09g08240.1 | LOC_Os09g08240 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g09800.1 | LOC_Os09g09800 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g11030.1 | LOC_Os09g11030 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os09g11950.1 | LOC_Os09g11950 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g16690.1 | LOC_Os09g16690 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os10g07598.1 | LOC_Os10g07598 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g11930.1 | LOC_Os10g11930 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os10g26930.1 | LOC_Os10g26930 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os11g07720.1 | LOC_Os11g07720 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g10830.1 | LOC_Os11g10830 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g22690.1 | LOC_Os11g22690 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os11g29450.1 | LOC_Os11g29450 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os11g29560.1 | LOC_Os11g29560 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g14270.1 | LOC_Os12g14270 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g16960.1 | LOC_Os12g16960 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g20350.1 | LOC_Os12g20350 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os12g23010.1 | LOC_Os12g23010 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g23540.1 | LOC_Os12g23540 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g28280.1 | LOC_Os12g28280 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os12g28340.1 | LOC_Os12g28340 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os12g43280.1 | LOC_Os12g43280 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0015074 | DNA integration | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |