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  5. LOC_Os05g27590.1

LOC_Os05g27590.1 (LOC_Os05g27590)


Aliases : LOC_Os05g27590

Description : no hits & (original description: none)


Gene families : OG0000933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g27590.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT3G10985 ATWI-12, WI12, SAG20 senescence associated gene 20 0.02 OrthoFinder output from all 47 species
Adi_g041386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G007800.1 Ceric.39G007800 not classified & original description: pacid=50583066... 0.03 OrthoFinder output from all 47 species
Dac_g00336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04210 ATWI-12, WI12, SAG20 Wound-induced protein 1 OS=Solanum tuberosum... 0.03 OrthoFinder output from all 47 species
LOC_Os07g49114.1 LOC_Os07g49114 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g04146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g06385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10429679g0010 ATWI-12, WI12, SAG20 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_63177g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g09096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g014940.3.1 Solyc09g014940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g07337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038384_P001 Zm00001e038384 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR009798 Wun1-like 60 177
No external refs found!