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  5. LOC_Os05g27580.1

LOC_Os05g27580.1 (LOC_Os05g27580)


Aliases : LOC_Os05g27580

Description : no hits & (original description: none)


Gene families : OG0000933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g27580.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Adi_g021315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10271.t1 Aspi01Gene10271 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031522_P001 Zm00001e031522 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038384_P001 Zm00001e038384 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009798 Wun1-like 141 252
No external refs found!