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  5. LOC_Os05g25180.1

LOC_Os05g25180.1 (LOC_Os05g25180)


Aliases : LOC_Os05g25180

Description : no hits & (original description: none)


Gene families : OG0001946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g25180.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00163180 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g108111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g02782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014295 No alias not classified & original description: CDS=49-1641 0.02 OrthoFinder output from all 47 species
Sam_g11875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 400 440
No external refs found!