- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : OHP, LOC_Os05g22730
Description : OHP1 LHC-related protein
Gene families : OG0006730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006730_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g22730.1 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00252840 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem... | 0.08 | OrthoFinder output from all 47 species | |
| AT5G02120 | OHP | one helix protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g015882 | OHP | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54203 | OHP | LHC-related protein *(OHP1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g05451 | OHP | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09201 | No alias | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g48648 | OHP | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene08529.t1 | OHP, Aspi01Gene08529 | LHC-related protein *(OHP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G031400.1 | OHP, Ceric.35G031400 | LHC-related protein *(OHP1) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Cre02.g109950 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g27459 | OHP | LHC-related protein *(OHP1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g02075 | OHP | LHC-related protein *(OHP1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g24229 | No alias | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10117352g0010 | OHP | OHP1 LHC-related protein | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g27125 | OHP | LHC-related protein *(OHP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08209 | OHP | LHC-related protein *(OHP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g60607 | OHP | LHC-related protein *(OHP1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c22_8010V3.1 | OHP, Pp3c22_8010 | one helix protein | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g015925 | OHP | LHC-related protein *(OHP1) & original description: CDS=1-414 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g30283 | No alias | LHC-related protein *(OHP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g011010.3.1 | OHP, Solyc09g011010 | OHP1 LHC-related protein | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10723 | OHP | LHC-related protein *(OHP1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032810_P001 | OHP, Zm00001e032810 | OHP1 LHC-related protein | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |