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  5. LOC_Os05g22716.1

LOC_Os05g22716.1 (LOC_Os05g22716)


Aliases : LOC_Os05g22716

Description : IF-1 translation initiation factor


Gene families : OG0011375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g22716.1
Cluster HCCA: Cluster_358

Target Alias Description ECC score Gene Family Method Actions
Ceric.05G049200.1 Ceric.05G049200 translation initiation factor *(IF-1) & original... 0.14 OrthoFinder output from all 47 species
Ceric.05G051900.1 Ceric.05G051900 translation initiation factor *(IF-1) & original... 0.13 OrthoFinder output from all 47 species
Ceric.1Z163600.1 Ceric.1Z163600 translation initiation factor *(IF-1) & original... 0.14 OrthoFinder output from all 47 species
Ceric.29G004000.1 Ceric.29G004000 translation initiation factor *(IF-1) & original... 0.14 OrthoFinder output from all 47 species
Ceric.38G008800.1 Ceric.38G008800 translation initiation factor *(IF-1) & original... 0.13 OrthoFinder output from all 47 species
Cre04.g218700 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 19 81
No external refs found!