LOC_Os02g13800.1

Description : transcription factor (HSF)

Gene families : OG_01_0000090 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000090_tree ,
OG_02_0000053 (LandPlants) Phylogenetic Tree(s): OG_02_0000053_tree ,
OG_03_0000104 (SeedPlants) Phylogenetic Tree(s): OG_03_0000104_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g13800.1
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00176p00025440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
AT2G26150	HSFA2, ATHSFA2	heat shock transcription factor A2	0.03	Archaeplastida
AT3G51910	AT-HSFA7A, HSFA7A	heat shock transcription factor A7A	0.04	Archaeplastida
AT3G63350	HSFA7B, AT-HSFA7B	winged-helix DNA-binding transcription factor family protein	0.04	Archaeplastida
AT5G54070	AT-HSFA9, HSFA9	heat shock transcription factor A9	0.09	Archaeplastida
GSVIVT01003118001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01019829001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
Gb_16343	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.01	Archaeplastida
Gb_37236	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os01g53220.1	No alias	transcription factor (HSF)	0.01	Archaeplastida
Pp3c1_32480V3.1	No alias	heat shock factor 3	0.02	Archaeplastida
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.06	Archaeplastida
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Solyc07g040680.3.1	No alias	transcription factor (HSF)	0.14	Archaeplastida
Zm00001e014408_P001	No alias	transcription factor (HSF)	0.12	Archaeplastida
Zm00001e019898_P001	No alias	transcription factor (HSF)	0.12	Archaeplastida
Zm00001e032930_P002	No alias	transcription factor (HSF)	0.05	Archaeplastida
Zm00001e037165_P002	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e041441_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
AMTR_s00176p00025440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
AT2G26150	HSFA2, ATHSFA2	heat shock transcription factor A2	0.03	LandPlants
AT3G24520	AT-HSFC1, HSFC1	heat shock transcription factor C1	0.01	LandPlants
AT3G51910	AT-HSFA7A, HSFA7A	heat shock transcription factor A7A	0.03	LandPlants
AT3G63350	HSFA7B, AT-HSFA7B	winged-helix DNA-binding transcription factor family protein	0.04	LandPlants
AT5G54070	AT-HSFA9, HSFA9	heat shock transcription factor A9	0.09	LandPlants
GSVIVT01003118001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	LandPlants
GSVIVT01019829001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
GSVIVT01035385001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
Gb_11758	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	LandPlants
Gb_19891	No alias	transcription factor (HSF)	0.01	LandPlants
MA_110587g0010	No alias	transcription factor (HSF)	0.02	LandPlants
MA_5374g0010	No alias	transcription factor (HSF)	0.02	LandPlants
Pp3c1_32480V3.1	No alias	heat shock factor 3	0.02	LandPlants
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.06	LandPlants
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.03	LandPlants
Solyc07g040680.3.1	No alias	transcription factor (HSF)	0.14	LandPlants
Zm00001e000467_P001	No alias	transcription factor (HSF)	0.02	LandPlants
Zm00001e003755_P002	No alias	transcription factor (HSF)	0.02	LandPlants
Zm00001e011633_P001	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	LandPlants
Zm00001e014408_P001	No alias	transcription factor (HSF)	0.11	LandPlants
Zm00001e024268_P001	No alias	transcription factor (HSF)	0.02	LandPlants
Zm00001e029052_P001	No alias	transcription factor (HSF)	0.02	LandPlants
Zm00001e032930_P002	No alias	transcription factor (HSF)	0.05	LandPlants
Zm00001e037165_P002	No alias	transcription factor (HSF)	0.02	LandPlants
Zm00001e041441_P001	No alias	transcription factor (HSF)	0.02	LandPlants
AT3G24520	AT-HSFC1, HSFC1	heat shock transcription factor C1	0.01	SeedPlants
Gb_37236	No alias	transcription factor (HSF)	0.01	SeedPlants
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.03	SeedPlants
Solyc11g064990.2.1	No alias	transcription factor (HSF)	0.01	SeedPlants
Zm00001e003755_P002	No alias	transcription factor (HSF)	0.02	SeedPlants
Zm00001e014408_P001	No alias	transcription factor (HSF)	0.11	SeedPlants
Zm00001e024268_P001	No alias	transcription factor (HSF)	0.02	SeedPlants
Zm00001e041441_P001	No alias	transcription factor (HSF)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	15	104

External Links

No external refs found!

LOC_Os02g13800.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation