LOC_Os08g31580 (Os08g0408500)


Aliases : Os08g0408500

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g31580
Cluster HCCA cluster: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G78080 RAP2.4 related to AP2 4 0.05 Gene family
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.01 Gene family
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 Gene family
GSVIVT01005747001 No alias No description available 0.02 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
GSVIVT01021146001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.05 Gene family
GSVIVT01036201001 No alias No description available 0.03 Gene family
LOC_Os01g12440 Os01g0224100 No description available 0.02 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.03 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os04g46400 Os04g0549700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os05g49700 Os05g0572000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os07g22770 Os07g0410700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.01 Gene family
LOC_Os09g39850 Os09g0572000 No description available 0.06 Gene family
MA_10031781g0010 No alias No description available 0.05 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_115502g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Smo104980 PACid_15415938 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Smo409196 PACid_15422590 No description available 0.01 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.02 Gene family
Solyc03g005500.1.1 Solyc03g005500.1 No description available 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.02 Gene family
Solyc06g065820.3.1 Solyc06g065820.3 No description available 0.01 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.02 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.02 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.02 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.01 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.01 Gene family
Zm00001d015759 GRMZM2G085678 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d019744 GRMZM2G060517 No description available 0.03 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.01 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.01 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d036536 GRMZM2G175543 No description available 0.03 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d048297 GRMZM2G399098 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 104 152
No external refs found!