LOC_Os05g13580.1 (LOC_Os05g13580)


Aliases : LOC_Os05g13580

Description : Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica (sp|q0djv6|cml18_orysj : 243.0)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g13580.1

Target Alias Description ECC score Gene Family Method Actions
AT2G36180 No alias EF hand calcium-binding protein family 0.02 OrthoFinder output from all 47 species
AT5G37770 TCH2, CML24 EF hand calcium-binding protein family 0.04 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13968 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01734 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34152 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36096 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17306 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67147.t1 Aspi01Gene67147 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g24003 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G028800.1 TCH2, CML24,... calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08581 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g14256 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g13533 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16905 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47228 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g15820.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Msp_g06515 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18745 CML41 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g01910 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005370.3.1 Solyc01g005370 Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.03 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45182 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031549_P001 Zm00001e031549 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 89 151
IPR002048 EF_hand_dom 5 65
No external refs found!