LOC_Os05g12474.1 (LOC_Os05g12474)


Aliases : LOC_Os05g12474

Description : no hits & (original description: none)


Gene families : OG0002005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g12474.1

Target Alias Description ECC score Gene Family Method Actions
AT1G16320 No alias Uncharacterized conserved protein (DUF2358) 0.03 OrthoFinder output from all 47 species
Aev_g12032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05051.t1 Aspi01Gene05051 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0529.g075796 No alias not classified & original description: CDS=57-1280 0.04 OrthoFinder output from all 47 species
Ceric.03G031300.1 Ceric.03G031300 not classified & original description: pacid=50572886... 0.02 OrthoFinder output from all 47 species
Ceric.07G081200.1 Ceric.07G081200 not classified & original description: pacid=50628006... 0.05 OrthoFinder output from all 47 species
Dac_g02709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g050110.3.1 Solyc05g050110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g03864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026074_P001 Zm00001e026074 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 117 228
No external refs found!