LOC_Os05g11790.1 (PKS18, CIPK20,...)

Aliases : PKS18, CIPK20, SnRK3.6, LOC_Os05g11790

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g11790.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00130p00110630	PKS18, CIPK20,...	Protein modification.phosphorylation.CAMK kinase...	0.11	OrthoFinder output from all 47 species
AT1G30270	SnRK3.23,...	CBL-interacting protein kinase 23	0.04	OrthoFinder output from all 47 species
AT5G45810	CIPK19, SnRK3.5	CBL-interacting protein kinase 19	0.1	OrthoFinder output from all 47 species
Adi_g079224	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g21469	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g46065	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aob_g08928	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aop_g02177	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aspi01Gene05687.t1	SNRK1.2, AKIN11,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Azfi_s0024.g020336	ATCIPK8, CIPK8,...	EC_2.7 transferase transferring phosphorus-containing...	0.01	OrthoFinder output from all 47 species
Cba_g23796	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Cre02.g075900	SNRK2-3, SNRK2.3, SRK2I	Serine/threonine-protein kinase SRK2I OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dac_g28647	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Dac_g30582	SnRK3.12, PKS6, CIPK9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g30216	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ehy_g07631	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ehy_g13876	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Gb_00014	No alias	CBL-interacting protein kinase 5 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
Gb_10748	No alias	SNF1-related protein kinase (SnRK3)	0.01	OrthoFinder output from all 47 species
Gb_16900	PKS18, CIPK20, SnRK3.6	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Gb_28012	WL4, SnRK3.9,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
LOC_Os01g10890.1	PKS18, CIPK20,...	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
LOC_Os01g55440.1	PKS18, CIPK20,...	SNF1-related protein kinase (SnRK3)	0.1	OrthoFinder output from all 47 species
MA_10430528g0010	PKS18, CIPK20, SnRK3.6	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
MA_11732g0010	CIPK3, SnRK3.17	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
MA_31203g0010	SnRK3.23,...	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
MA_70100g0010	SnRK3.12, PKS6, CIPK9	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
MA_819000g0010	No alias	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Mp6g18720.1	KIN10, SNRK1.1, AKIN10	catalytic subunit alpha of SNF1-related SnRK1 protein...	0.02	OrthoFinder output from all 47 species
Msp_g01618	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Msp_g06503	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Nbi_g02200	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Nbi_g06216	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Nbi_g06774	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Nbi_g11113	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pir_g01902	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pir_g18186	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Pir_g47248	SnRK3.3, CIPK4	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001339	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020493	CIPK3, SnRK3.17	not classified & original description: CDS=305-535	0.03	OrthoFinder output from all 47 species
Sam_g24801	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sam_g34168	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sam_g39314	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Solyc05g047600.4.1	SnRK3.12, PKS6,...	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
Solyc05g052270.3.1	PKS2, CIPK10,...	SNF1-related protein kinase (SnRK3)	0.06	OrthoFinder output from all 47 species
Solyc09g018280.1.1	ATSR1, CIPK14,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Solyc10g085450.3.1	ATSR1, CIPK14,...	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
Spa_g10961	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Tin_g25531	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Tin_g28576	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Zm00001e022467_P001	CIPK6, SIP3,...	SNF1-related protein kinase (SnRK3)	0.05	OrthoFinder output from all 47 species
Zm00001e026022_P001	PKS18, CIPK20,...	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
Zm00001e027413_P002	WL4, SnRK3.9,...	SNF1-related protein kinase (SnRK3)	0.05	OrthoFinder output from all 47 species
Zm00001e029014_P003	PKS18, CIPK20,...	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
Zm00001e035848_P002	PKS2, CIPK10,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	12	276
IPR004041	NAF_dom	307	368

External Links

No external refs found!

LOC_Os05g11790.1 (PKS18, CIPK20,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation