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  5. LOC_Os05g11300.1

LOC_Os05g11300.1 (LOC_Os05g11300)


Aliases : LOC_Os05g11300

Description : no hits & (original description: none)


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g11300.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00245950 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00092670 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G14819 No alias Protein of unknown function (DUF1677) 0.06 OrthoFinder output from all 47 species
Aev_g03922 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26438.t1 Aspi01Gene26438 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007680 No alias not classified & original description: CDS=1-528 0.03 OrthoFinder output from all 47 species
Ceric.13G005200.1 Ceric.13G005200 not classified & original description: pacid=50635812... 0.03 OrthoFinder output from all 47 species
Dac_g45010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03054 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_32616 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g46300.1 LOC_Os03g46300 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g01634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10279500g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Msp_g10600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g62220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49689 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g05061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 75 161
No external refs found!