LOC_Os05g10730.1 (MRP6, ATMRP6, ABCC8,...)

Aliases : MRP6, ATMRP6, ABCC8, LOC_Os05g10730

Description : subfamily ABCC transporter

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g10730.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00219490	MRP10, ATMRP10,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Adi_g011351	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g114829	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g10093	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g33144	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g42688	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g04097	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.1	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.2	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.3	ATMRP8, MRP8, ABCC6	ABC transporter C family member 6 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001254.8	MRP10, ATMRP10, ABCC14	No description available	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.190	ATABCC5, MRP5,...	ABC transporter C family member 4 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.191	ATMRP12, MRP12, ABCC11	ABC transporter C family member 11 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020592.4	ATMRP12, MRP12, ABCC11	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre07.g325761	ATMRP8, MRP8, ABCC6	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre13.g564900	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Cre17.g734612	AtABCC2, ABCC2,...	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g05198	ATABCC5, MRP5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g05534	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g12889	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g27864	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g31128	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g26277	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01021595001	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Lfl_g38983	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10261902g0010	EST3, MRP4, ATMRP4, ABCC4	ABC transporter C family member 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_10436190g0020	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_629244g0010	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
MA_635466g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp4g11930.1	ATABCC5, MRP5,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Msp_g18785	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g22071	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g08952	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g32956	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g37214	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g07505	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g17304	ATMRP14, ABCC10, MRP14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g23741	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g29278	No alias	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g36820	No alias	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g50141	No alias	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g50406	No alias	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo145432	MRP6, ATMRP6, ABCC8	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo147933	EST3, MRP4, ATMRP4, ABCC4	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Tin_g12692	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
BP	GO:0017004	cytochrome complex assembly	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1262	1410
IPR011527	ABC1_TM_dom	935	1194
IPR011527	ABC1_TM_dom	352	583
IPR003439	ABC_transporter-like_ATP-bd	649	783

External Links

No external refs found!

LOC_Os05g10730.1 (MRP6, ATMRP6, ABCC8,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation