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Aliases : LOC_Os05g09630
Description : transcription factor (NDX)
Gene families : OG0003424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003424_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g09630.1 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00031700 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.05 | OrthoFinder output from all 47 species | |
| AT4G03090 | No alias | sequence-specific DNA binding;sequence-specific DNA... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011555 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086373 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g15011 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02709 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g22927 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13614 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71080.t1 | Aspi01Gene71080 | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07774 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g08164 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011024001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20565 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19221 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g16560.1 | No alias | transcription factor (NDX) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g43437 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12626 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g45687 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30227 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g074330.3.1 | Solyc09g074330 | transcription factor (NDX) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g07603 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011342_P004 | Zm00001e011342 | transcription factor (NDX) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e021086_P004 | Zm00001e021086 | transcription factor (NDX) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006906 | vesicle fusion | IEP | HCCA |
| BP | GO:0007030 | Golgi organization | IEP | HCCA |
| BP | GO:0016050 | vesicle organization | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0048280 | vesicle fusion with Golgi apparatus | IEP | HCCA |
| BP | GO:0048284 | organelle fusion | IEP | HCCA |
| BP | GO:0061024 | membrane organization | IEP | HCCA |
| BP | GO:0061025 | membrane fusion | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0090174 | organelle membrane fusion | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |