LOC_Os05g07940.1 (LOC_Os05g07940)


Aliases : LOC_Os05g07940

Description : no hits & (original description: none)


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g07940.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00168190 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G28420 No alias Lactoylglutathione lyase / glyoxalase I family protein 0.03 OrthoFinder output from all 47 species
Als_g39816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04382.t1 Aspi01Gene04382 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71507.t1 Aspi01Gene71507 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035831 No alias not classified & original description: CDS=355-885 0.02 OrthoFinder output from all 47 species
Dac_g24850 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g02053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g41825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428538g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10436228g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_193904g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7437g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g06071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005398 No alias not classified & original description: CDS=1-540 0.02 OrthoFinder output from all 47 species
Sam_g11779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g088010.1.1 Solyc01g088010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g084410.3.1 Solyc02g084410 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g116530.3.1 Solyc03g116530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026712_P002 Zm00001e026712 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e035745_P001 Zm00001e035745 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 23 141
No external refs found!