LOC_Os05g07650.1 (LOC_Os05g07650)


Aliases : LOC_Os05g07650

Description : Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana (sp|f4jre0|tmn12_arath : 994.0)


Gene families : OG0001938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001938_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g07650.1

Target Alias Description ECC score Gene Family Method Actions
AT4G12650 No alias Endomembrane protein 70 protein family 0.05 OrthoFinder output from all 47 species
AT5G35160 No alias Endomembrane protein 70 protein family 0.03 OrthoFinder output from all 47 species
Adi_g055250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0104.g044896 No alias not classified & original description: CDS=39-2024 0.04 OrthoFinder output from all 47 species
Ceric.26G022900.1 Ceric.26G022900 not classified & original description: pacid=50600157... 0.05 OrthoFinder output from all 47 species
Ceric.30G004200.1 Ceric.30G004200 not classified & original description: pacid=50608321... 0.03 OrthoFinder output from all 47 species
Dac_g07323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001034001 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01030146001 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03733 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g07755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428354g0010 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp6g10640.1 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g03216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016410 No alias not classified & original description: CDS=1-1929 0.04 OrthoFinder output from all 47 species
Sam_g09732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo175941 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc07g007030.1.1 Solyc07g007030 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc07g056050.1.1 Solyc07g056050 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc12g010390.2.1 Solyc12g010390 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g07413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016131_P001 Zm00001e016131 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 60 608
No external refs found!