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  5. LOC_Os05g07220.1

LOC_Os05g07220.1 (LOC_Os05g07220)


Aliases : LOC_Os05g07220

Description : B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0)


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g07220.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00133810 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00128180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
AT2G35140 No alias DCD (Development and Cell Death) domain protein 0.01 OrthoFinder output from all 47 species
Adi_g007845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g128031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40676.t1 Aspi01Gene40676 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G040700.1 Ceric.18G040700 not classified & original description: pacid=50621172... 0.06 OrthoFinder output from all 47 species
Dac_g10259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032736001 No alias B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Gb_04338 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.9) 0.03 OrthoFinder output from all 47 species
Len_g10339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_112899g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.5) 0.02 OrthoFinder output from all 47 species
MA_184449g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.04 OrthoFinder output from all 47 species
Msp_g13161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013885 No alias not classified & original description: CDS=1-2919 0.02 OrthoFinder output from all 47 species
Sam_g04265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g42263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025841_P002 Zm00001e025841 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 116.0) 0.03 OrthoFinder output from all 47 species
Zm00001e031088_P005 Zm00001e031088 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 868 908
IPR006652 Kelch_1 912 955
IPR006652 Kelch_1 1004 1039
IPR006652 Kelch_1 816 860
IPR006652 Kelch_1 957 1002
IPR013989 Dev_and_cell_death_domain 35 163
No external refs found!