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  5. LOC_Os05g05800.1

LOC_Os05g05800.1 (TIR1, LOC_Os05g05800)


Aliases : TIR1, LOC_Os05g05800

Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g05800.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g04147 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Dde_g10385 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g02828 COI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c9_1680V3.1 Pp3c9_1680 RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g14938 No alias component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e023831_P001 Zm00001e023831 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 20 58
IPR041101 Transp_inhibit 77 123
IPR001611 Leu-rich_rpt 166 181
No external refs found!