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  5. LOC_Os05g04510.1

LOC_Os05g04510.1 (MAT1, AtSAM1, SAM1,...)


Aliases : MAT1, AtSAM1, SAM1, SAM-1, LOC_Os05g04510

Description : S-adenosyl methionine synthetase


Gene families : OG0000645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000645_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g04510.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00073480 SAM2, MAT2,... Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.03 OrthoFinder output from all 47 species
AT1G02500 MAT1, AtSAM1, SAM1, SAM-1 S-adenosylmethionine synthetase 1 0.13 OrthoFinder output from all 47 species
AT2G36880 MAT3 methionine adenosyltransferase 3 0.19 OrthoFinder output from all 47 species
AT4G01850 SAM2, MAT2, AtSAM2, SAM-2 S-adenosylmethionine synthetase 2 0.13 OrthoFinder output from all 47 species
Aev_g06470 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aev_g31185 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Ala_g10857 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Aob_g04291 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Aop_g18643 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Aop_g68673 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.08 OrthoFinder output from all 47 species
Azfi_s0170.g055593 SAM2, MAT2, AtSAM2, SAM-2 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Azfi_s0232.g059327 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Cba_g13258 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Cba_g14329 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Cba_g50569 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Ceric.06G042500.1 SAM2, MAT2,... EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Ceric.23G071300.1 SAM2, MAT2,... EC_2.5 transferase transferring alkyl or aryl group,... 0.07 OrthoFinder output from all 47 species
Ceric.23G071400.1 MAT1, AtSAM1,... EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001530.4 SAMS3, MTO3, MAT4 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.01 OrthoFinder output from all 47 species
Cre06.g250200 MAT3 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.03 OrthoFinder output from all 47 species
Dcu_g08107 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Dcu_g27683 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.08 OrthoFinder output from all 47 species
Dcu_g46795 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.07 OrthoFinder output from all 47 species
GSVIVT01028205001 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.11 OrthoFinder output from all 47 species
GSVIVT01031313001 SAMS3, MTO3, MAT4 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.03 OrthoFinder output from all 47 species
GSVIVT01033651001 MAT3 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.06 OrthoFinder output from all 47 species
Gb_29408 SAMS3, MTO3, MAT4 S-adenosyl methionine synthetase 0.03 OrthoFinder output from all 47 species
Gb_29410 SAMS3, MTO3, MAT4 S-adenosyl methionine synthetase 0.06 OrthoFinder output from all 47 species
Gb_29411 SAMS3, MTO3, MAT4 S-adenosyl methionine synthetase 0.05 OrthoFinder output from all 47 species
Len_g14427 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Lfl_g02008 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Lfl_g18263 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Lfl_g34452 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
MA_197296g0010 SAMS3, MTO3, MAT4 S-adenosyl methionine synthetase 0.04 OrthoFinder output from all 47 species
MA_58651g0010 MAT3 S-adenosyl methionine synthetase 0.04 OrthoFinder output from all 47 species
Nbi_g03548 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.09 OrthoFinder output from all 47 species
Nbi_g14290 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Pir_g39910 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ppi_g07426 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000669 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Sam_g14733 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Smo155092 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.07 OrthoFinder output from all 47 species
Smo168213 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.06 OrthoFinder output from all 47 species
Solyc01g101060.4.1 SAM2, MAT2,... S-adenosyl methionine synthetase 0.04 OrthoFinder output from all 47 species
Solyc09g008280.2.1 MAT3, Solyc09g008280 S-adenosyl methionine synthetase 0.04 OrthoFinder output from all 47 species
Solyc10g083970.1.1 MAT3, Solyc10g083970 S-adenosyl methionine synthetase 0.06 OrthoFinder output from all 47 species
Spa_g14825 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.1 OrthoFinder output from all 47 species
Spa_g14826 SAM2, MAT2, AtSAM2, SAM-2 EC_2.5 transferase transferring alkyl or aryl group,... 0.08 OrthoFinder output from all 47 species
Spa_g20589 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Spa_g30359 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.08 OrthoFinder output from all 47 species
Zm00001e026226_P001 MAT1, AtSAM1,... S-adenosyl methionine synthetase 0.08 OrthoFinder output from all 47 species
Zm00001e040353_P003 SAM2, MAT2,... S-adenosyl methionine synthetase 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEA Interproscan
BP GO:0006556 S-adenosylmethionine biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022630 S-AdoMet_synt_C 243 384
IPR022629 S-AdoMet_synt_central 120 241
IPR022628 S-AdoMet_synt_N 7 104
No external refs found!