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  5. LOC_Os05g03100.1

LOC_Os05g03100.1 (UPL4, LOC_Os05g03100)


Aliases : UPL4, LOC_Os05g03100

Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g03100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00119160 UPL3, KAK,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Ala_g02725 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39472.t1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06937 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08697 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09278 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19132 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41653 UPL3, KAK not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000569 HECT_dom 889 1203
No external refs found!