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  5. LOC_Os05g02480.1

LOC_Os05g02480.1 (LOC_Os05g02480)


Aliases : LOC_Os05g02480

Description : no hits & (original description: none)


Gene families : OG0001400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g02480.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT3G09120 No alias Protein of unknown function (DUF674) 0.04 OrthoFinder output from all 47 species
AT5G01150 No alias Protein of unknown function (DUF674) 0.05 OrthoFinder output from all 47 species
AT5G37320 No alias Protein of unknown function (DUF674) 0.03 OrthoFinder output from all 47 species
AT5G43240 No alias Protein of unknown function (DUF674) 0.02 OrthoFinder output from all 47 species
Gb_20221 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g069800.2.1 Solyc06g069800 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e007075_P001 Zm00001e007075 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007081_P003 Zm00001e007081 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007083_P001 Zm00001e007083 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e016867_P001 Zm00001e016867 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016868_P001 Zm00001e016868 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR007750 DUF674 5 242
No external refs found!