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  5. LOC_Os05g01994.1

LOC_Os05g01994.1 (LOC_Os05g01994)


Aliases : LOC_Os05g01994

Description : no hits & (original description: none)


Gene families : OG0005188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g01994.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT2G29020 No alias Rab5-interacting family protein 0.04 OrthoFinder output from all 47 species
AT5G59410 No alias Rab5-interacting family protein 0.03 OrthoFinder output from all 47 species
Ala_g14036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010647 No alias not classified & original description: CDS=100-453 0.02 OrthoFinder output from all 47 species
Ceric.08G039500.1 Ceric.08G039500 not classified & original description: pacid=50637738... 0.03 OrthoFinder output from all 47 species
Ceric.18G032300.1 Ceric.18G032300 not classified & original description: pacid=50621167... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.44 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_16099 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g20010.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g48443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g076260.3.1 Solyc06g076260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029653_P001 Zm00001e029653 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR029008 EMC6-like 44 122
No external refs found!