1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g59624.2

LOC_Os04g59624.2 (CHR24, LOC_Os04g59624)


Aliases : CHR24, LOC_Os04g59624

Description : chromatin remodeling factor (ERCC6)


Gene families : OG0005354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005354_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g59624.2

Target Alias Description ECC score Gene Family Method Actions
AT5G63950 CHR24 chromatin remodeling 24 0.04 OrthoFinder output from all 47 species
Als_g12065 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0558.g076902 CHR24 chromatin remodeling factor *(ERCC6) & original... 0.05 OrthoFinder output from all 47 species
Ceric.22G065500.1 CHR24, Ceric.22G065500 chromatin remodeling factor *(ERCC6) & original... 0.03 OrthoFinder output from all 47 species
Ceric.22G065600.1 CHR24, Ceric.22G065600 not classified & original description: pacid=50613904... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001292.5 CHR24 Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001292.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre03.g183350 CHR24 Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01026450001 CHR24 Chromatin organisation.chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Gb_17075 CHR24 chromatin remodeling factor (ERCC6) 0.04 OrthoFinder output from all 47 species
MA_18372g0010 CHR24 Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Mp1g29760.1 CHR24 chromatin remodeling factor (ERCC6) 0.06 OrthoFinder output from all 47 species
Msp_g36236 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03168 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g068280.3.1 CHR24, Solyc01g068280 chromatin remodeling factor (ERCC6) 0.12 OrthoFinder output from all 47 species
Spa_g24729 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007521_P001 CHR24, Zm00001e007521 chromatin remodeling factor (ERCC6) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 295 585
IPR001650 Helicase_C 639 751
No external refs found!