LOC_Os04g59520.1 (LOC_Os04g59520)


Aliases : LOC_Os04g59520

Description : no description available(sp|q9m2r0|ftip3_arath : 977.0)


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g59520.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00218970 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G00700 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT4G11610 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT5G48060 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
Adi_g115598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10498.t1 Aspi01Gene10498 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36012.t1 Aspi01Gene36012 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013224 No alias not classified & original description: CDS=1-3375 0.03 OrthoFinder output from all 47 species
Azfi_s0171.g055682 No alias not classified & original description: CDS=227-3172 0.02 OrthoFinder output from all 47 species
Ceric.19G076300.1 Ceric.19G076300 not classified & original description: pacid=50576019... 0.02 OrthoFinder output from all 47 species
Ceric.30G000500.1 Ceric.30G000500 not classified & original description: pacid=50608027... 0.03 OrthoFinder output from all 47 species
Dcu_g20485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032042001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08022 No alias no description available(sp|q9m2r0|ftip3_arath : 1266.0) 0.03 OrthoFinder output from all 47 species
Gb_20033 No alias no description available(sp|q9m2r0|ftip3_arath : 959.0) 0.09 OrthoFinder output from all 47 species
Gb_33902 No alias no description available(sp|q60ew9|ftip7_orysj : 1244.0) 0.03 OrthoFinder output from all 47 species
LOC_Os02g44490.1 LOC_Os02g44490 no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.08 OrthoFinder output from all 47 species
LOC_Os07g07070.1 LOC_Os07g07070 Protein QUIRKY OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g39991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g20141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025914 No alias not classified & original description: CDS=1-2928 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s1547.g028074 No alias not classified & original description: CDS=1-3048 0.02 OrthoFinder output from all 47 species
Solyc01g006620.3.1 Solyc01g006620 no description available(sp|q9m2r0|ftip3_arath : 1132.0) 0.07 OrthoFinder output from all 47 species
Solyc01g086700.4.1 Solyc01g086700 no description available(sp|q60ew9|ftip7_orysj : 1084.0) 0.05 OrthoFinder output from all 47 species
Solyc01g086720.3.1 Solyc01g086720 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g077920.1.1 Solyc03g077920 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023184_P001 Zm00001e023184 no description available(sp|q9m2r0|ftip3_arath : 827.0) 0.03 OrthoFinder output from all 47 species
Zm00001e024540_P001 Zm00001e024540 no description available(sp|q60ew9|ftip7_orysj : 170.0) 0.04 OrthoFinder output from all 47 species
Zm00001e027805_P001 QKY, Zm00001e027805 Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e034984_P001 Zm00001e034984 no description available(sp|q9m2r0|ftip3_arath : 1021.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 3 102
IPR000008 C2_dom 452 557
IPR000008 C2_dom 619 719
IPR000008 C2_dom 290 382
IPR013583 PRibTrfase_C 864 1021
No external refs found!