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  5. LOC_Os04g59380.1

LOC_Os04g59380.1 (LOC_Os04g59380)


Aliases : LOC_Os04g59380

Description : C2H2 zinc finger transcription factor


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g59380.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00197580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00164330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00199p00026650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT1G11490 No alias zinc finger (C2H2 type) family protein 0.03 OrthoFinder output from all 47 species
AT1G75710 No alias C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
AT4G27240 No alias zinc finger (C2H2 type) family protein 0.03 OrthoFinder output from all 47 species
Als_g12232 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g13375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58391.t1 Aspi01Gene58391 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69880.t1 Aspi01Gene69880 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0305.g063895 No alias not classified & original description: CDS=1048-1284 0.03 OrthoFinder output from all 47 species
Ceric.17G019700.1 Ceric.17G019700 not classified & original description: pacid=50618170... 0.03 OrthoFinder output from all 47 species
Ceric.32G006400.1 Ceric.32G006400 not classified & original description: pacid=50597460... 0.04 OrthoFinder output from all 47 species
Ceric.39G048600.1 Ceric.39G048600 not classified & original description: pacid=50582455... 0.02 OrthoFinder output from all 47 species
Dac_g15387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008819001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01008925001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 OrthoFinder output from all 47 species
GSVIVT01014576001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
GSVIVT01024778001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_08005 No alias C2H2 zinc finger transcription factor. sugar efflux... 0.02 OrthoFinder output from all 47 species
Gb_25842 No alias C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Gb_32897 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os01g57650.1 LOC_Os01g57650 C2H2 zinc finger transcription factor 0.08 OrthoFinder output from all 47 species
LOC_Os03g15790.1 LOC_Os03g15790 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
LOC_Os06g46910.1 LOC_Os06g46910 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Len_g01208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426153g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_13576g0010 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_525155g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g04292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014168 No alias not classified & original description: CDS=1-1884 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018625 No alias not classified & original description: CDS=1-1434 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023140 No alias not classified & original description: CDS=905-2272 0.05 OrthoFinder output from all 47 species
Solyc04g081370.2.1 Solyc04g081370 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc07g063970.3.1 Solyc07g063970 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Spa_g50745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019606_P002 Zm00001e019606 C2H2 zinc finger transcription factor 0.12 OrthoFinder output from all 47 species
Zm00001e028937_P001 Zm00001e028937 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e040454_P002 Zm00001e040454 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!