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  5. LOC_Os04g58680.1

LOC_Os04g58680.1 (NF-YC2, ATHAP5B,...)


Aliases : NF-YC2, ATHAP5B, HAP5B, LOC_Os04g58680

Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g58680.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257290 NF-YC3,... RNA biosynthesis.transcriptional activation.NF-Y... 0.11 OrthoFinder output from all 47 species
AT1G56170 NF-YC2, ATHAP5B, HAP5B nuclear factor Y, subunit C2 0.04 OrthoFinder output from all 47 species
Aev_g06656 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23954.t1 NF-YC2, ATHAP5B,... component *(NF-YC) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene64493.t1 HAP5A, NF-YC1,... component *(NF-YC) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Gb_13087 NF-YC2, ATHAP5B, HAP5B component NF-YC of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
MA_10163039g0010 HAP5A, NF-YC1, ATHAP5A component NF-YC of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Solyc03g111450.3.1 HAP5A, NF-YC1,... component NF-YC of NF-Y transcription factor complex 0.07 OrthoFinder output from all 47 species
Zm00001e034481_P001 NF-YC3, Zm00001e034481 component NF-YC of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 52 100
No external refs found!