1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g58504.1

LOC_Os04g58504.1 (LOC_Os04g58504)


Aliases : LOC_Os04g58504

Description : Choline transporter protein 1 OS=Arabidopsis thaliana (sp|q94an2|cher1_arath : 995.0)


Gene families : OG0003269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003269_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g58504.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g002033 No alias choline transporter *(CHER/CTL1) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.16 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
MA_10429022g0020 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_89558g0010 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g063230.3.1 Solyc07g063230 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e006509_P001 Zm00001e006509 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e024273_P001 Zm00001e024273 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 338 681
No external refs found!