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  5. LOC_Os04g58320.2

LOC_Os04g58320.2 (LOC_Os04g58320)


Aliases : LOC_Os04g58320

Description : RING-HC-class E3 ligase


Gene families : OG0001060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g58320.2

Target Alias Description ECC score Gene Family Method Actions
AT3G47160 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G01520 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g00473 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07398 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29410 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01010297001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Pir_g09310 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18727 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g078460.3.1 Solyc02g078460 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc10g009020.3.1 Solyc10g009020 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!