LOC_Os04g58280.2 (LOC_Os04g58280)


Aliases : LOC_Os04g58280

Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 110.0)


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g58280.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00269560 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00066790 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Als_g47603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0174.g055900 No alias not classified & original description: CDS=333-1163 0.03 OrthoFinder output from all 47 species
Cba_g13395 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G004300.1 Ceric.04G004300 not classified & original description: pacid=50631114... 0.03 OrthoFinder output from all 47 species
Dde_g11583 ATAILP1, AILP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11584 ATAILP1, AILP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014386001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
GSVIVT01017899001 ATAILP1, AILP1 Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
GSVIVT01018050001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Gb_16125 ATAILP1, AILP1 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Lfl_g28509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429415g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10434639g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
MA_12061g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
MA_20406g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
MA_65113g0010 ATAILP1, AILP1 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Nbi_g18276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022207 No alias not classified & original description: CDS=1-915 0.02 OrthoFinder output from all 47 species
Sam_g07487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 2 231
No external refs found!