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  5. LOC_Os04g57800.1

LOC_Os04g57800.1 (LOC_Os04g57800)


Aliases : LOC_Os04g57800

Description : component BPH1 of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG0004897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g57800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00109650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Aev_g18349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70376 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14905.t1 Aspi01Gene14905 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene43653.t1 Aspi01Gene43653 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G062000.1 Ceric.17G062000 not classified & original description: pacid=50618591... 0.03 OrthoFinder output from all 47 species
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.04 OrthoFinder output from all 47 species
GSVIVT01006403001 No alias BTB/POZ domain-containing protein At3g22104... 0.02 OrthoFinder output from all 47 species
Ore_g44501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026451 No alias not classified & original description: CDS=25-1905 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0260.g026870 No alias not classified & original description: CDS=25-1905 0.05 OrthoFinder output from all 47 species
Sam_g09031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo422107 No alias BTB/POZ domain-containing protein At5g03250... 0.04 OrthoFinder output from all 47 species
Solyc07g052970.3.1 Solyc07g052970 BTB/POZ domain-containing protein At3g22104... 0.01 OrthoFinder output from all 47 species
Solyc11g040040.2.1 Solyc11g040040 component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Spa_g34890 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g47092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010520_P002 Zm00001e010520 BTB/POZ domain-containing protein At3g22104... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 206 439
No external refs found!