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  5. LOC_Os04g57370.1

LOC_Os04g57370.1 (SOBER1, LOC_Os04g57370)


Aliases : SOBER1, LOC_Os04g57370

Description : SOBER/TIPSY effector-triggered immunity suppressor


Gene families : OG0001188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g57370.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Aop_g11816 SOBER1 immunity suppressor (SOBER/TIPSY) of effector-triggered... 0.02 OrthoFinder output from all 47 species
Azfi_s0223.g058846 SOBER1 immunity suppressor (SOBER/TIPSY) of effector-triggered... 0.03 OrthoFinder output from all 47 species
MA_509219g0010 SOBER1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo121880 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003140 PLipase/COase/thioEstase 46 257
No external refs found!