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  5. LOC_Os04g56800.1

LOC_Os04g56800.1 (PIN1AT, LOC_Os04g56800)


Aliases : PIN1AT, LOC_Os04g56800

Description : peptidyl-prolyl isomerase


Gene families : OG0001668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56800.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g22993 PIN1AT Parvulin-type protein folding catalyst *(PIN) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020801.75 PIN1AT Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Mp2g15410.1 No alias peptidyl-prolyl isomerase 0.03 OrthoFinder output from all 47 species
Solyc02g062250.3.1 PIN1AT, Solyc02g062250 peptidyl-prolyl isomerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000297 PPIase_PpiC 126 233
No external refs found!