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  5. LOC_Os04g56770.1

LOC_Os04g56770.1 (LOC_Os04g56770)


Aliases : LOC_Os04g56770

Description : protein factor U11/U12-25K of U11/U12 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG0002908 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56770.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Aop_g03680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20518 No alias component *(U11/U12-25K) of U11/U12 snRNP complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR040610 SNRNP25_ubiquitin 75 125
No external refs found!