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  5. LOC_Os04g56690.1

LOC_Os04g56690.1 (LOC_Os04g56690)


Aliases : LOC_Os04g56690

Description : no hits & (original description: none)


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56690.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00212020 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00021670 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00089900 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G75590 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT2G28085 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT2G36210 No alias SAUR-like auxin-responsive protein family 0.04 OrthoFinder output from all 47 species
AT3G60690 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT4G00880 No alias SAUR-like auxin-responsive protein family 0.05 OrthoFinder output from all 47 species
Adi_g008460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g45209 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g49638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene09109.t1 Aspi01Gene09109 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09110.t1 Aspi01Gene09110 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09775.t1 Aspi01Gene09775 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14018.t1 Aspi01Gene14018 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14026.t1 Aspi01Gene14026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42101.t1 Aspi01Gene42101 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42595.t1 Aspi01Gene42595 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42611.t1 Aspi01Gene42611 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42614.t1 Aspi01Gene42614 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45383.t1 Aspi01Gene45383 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45399.t1 Aspi01Gene45399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53104.t1 Aspi01Gene53104 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53930.t1 Aspi01Gene53930 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59218.t1 Aspi01Gene59218 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035889 No alias not classified & original description: CDS=1-732 0.03 OrthoFinder output from all 47 species
Cba_g01422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g54623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G038700.1 Ceric.24G038700 not classified & original description: pacid=50628548... 0.03 OrthoFinder output from all 47 species
Dac_g14324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009875001 No alias Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01029559001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033868001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_12165 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_14446 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_18130 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_39589 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52990.1 LOC_Os02g52990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g45950.1 LOC_Os06g45950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g12661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430649g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_16245g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_17902g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_185823g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_40440g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_5864g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_91102g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g11212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo90204 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g110630.4.1 Solyc01g110630 Auxin-induced protein 15A OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Solyc01g110825.1.1 Solyc01g110825 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g052970.3.1 Solyc04g052970 Indole-3-acetic acid-induced protein ARG7 OS=Vigna... 0.03 OrthoFinder output from all 47 species
Solyc04g053000.1.1 Solyc04g053000 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g081250.1.1 Solyc04g081250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g053260.1.1 Solyc06g053260 Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g066560.1.1 Solyc07g066560 Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc10g084010.1.1 Solyc10g084010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011680.1.1 Solyc11g011680 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e005213_P001 Zm00001e005213 Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e006929_P001 Zm00001e006929 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030348_P001 Zm00001e030348 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037770_P001 Zm00001e037770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 19 107
No external refs found!