LOC_Os04g56440.1 (LOC_Os04g56440)


Aliases : LOC_Os04g56440

Description : Protein EMSY-LIKE 3 OS=Arabidopsis thaliana (sp|f4k2f0|eml3_arath : 257.0)


Gene families : OG0001561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001561_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56440.1

Dac_g02741 details <td><a href="/sequence/view/1476648" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1476648">Zm00001e009307_P002</a></td> <td>Zm00001e009307</td> <td>Protein EMSY-LIKE 3 OS=Arabidopsis thaliana...</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/40902450" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1645657/69/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1477392" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1477392">Zm00001e010070_P003</a></td> <td>Zm00001e010070</td> <td>Protein EMSY-LIKE 3 OS=Arabidopsis thaliana...</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/40902452" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1645657/69/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1489301" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1489301">Zm00001e022216_P004</a></td> <td>Zm00001e022216</td> <td>Protein EMSY-LIKE 3 OS=Arabidopsis thaliana...</td> <td>0.05</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/40902454" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1645657/69/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1491414" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1491414">Zm00001e024387_P004</a></td> <td>Zm00001e024387</td> <td>Protein EMSY-LIKE 3 OS=Arabidopsis thaliana...</td> <td>0.04</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/40902456" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1645657/69/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1500486" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1500486">Zm00001e033656_P003</a></td> <td>Zm00001e033656</td> <td>Protein EMSY-LIKE 3 OS=Arabidopsis thaliana...</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/40902458" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1645657/69/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No Predicted GO terms available for this sequence</p></td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/4617">IPR005491</a></td> <td class="col-xs-5">ENT_dom</td> <td class="col-xs-2">54</td> <td class="col-xs-2">122</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div 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Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00184660 evm_27.TU.AmTr_v1... Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aop_g17440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014116 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16668 No alias histone H3K36 methylation reader *(EML) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01001373001 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033513001 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Lfl_g11931 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
MA_89637g0010 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pp3c16_11440V3.1 Pp3c16_11440 Emsy N Terminus (ENT)/ plant Tudor-like... 0.01 OrthoFinder output from all 47 species
Smo410248 No alias Protein EMSY-LIKE 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo446942 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g073960.4.1 Solyc01g073960 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species