LOC_Os04g56080.1 (LOC_Os04g56080)

Aliases : LOC_Os04g56080

Description : protein kinase (SD-2)

Gene families : OG0000553 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000553_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g56080.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00075p00034690	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.TKL kinase...	0.03	OrthoFinder output from all 47 species
Ala_g03007	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g21196	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene51658.t1	Aspi01Gene51658	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene51660.t1	Aspi01Gene51660	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g71886	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dde_g23985	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
GSVIVT01009410001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	OrthoFinder output from all 47 species
GSVIVT01009413001	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
GSVIVT01009421001	RLK4	G-type lectin S-receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
GSVIVT01034080001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01034086001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.02	OrthoFinder output from all 47 species
Gb_35753	No alias	protein kinase (SD-2)	0.03	OrthoFinder output from all 47 species
LOC_Os01g47810.1	LOC_Os01g47810	protein kinase (SD-2)	0.03	OrthoFinder output from all 47 species
LOC_Os01g47900.1	LOC_Os01g47900	protein kinase (SD-2)	0.07	OrthoFinder output from all 47 species
LOC_Os01g66250.1	LOC_Os01g66250	protein kinase (SD-2)	0.05	OrthoFinder output from all 47 species
LOC_Os04g56090.1	LOC_Os04g56090	protein kinase (SD-2)	0.06	OrthoFinder output from all 47 species
LOC_Os06g06960.1	LOC_Os06g06960	protein kinase (SD-2)	0.06	OrthoFinder output from all 47 species
LOC_Os06g37750.1	LOC_Os06g37750	protein kinase (SD-2)	0.03	OrthoFinder output from all 47 species
LOC_Os11g03840.1	LOC_Os11g03840	protein kinase (SD-2)	0.06	OrthoFinder output from all 47 species
LOC_Os11g03860.1	RK3, ARK3, LOC_Os11g03860	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.03	OrthoFinder output from all 47 species
LOC_Os12g03640.1	LOC_Os12g03640	protein kinase (SD-2)	0.05	OrthoFinder output from all 47 species
LOC_Os12g03650.1	LOC_Os12g03650	protein kinase (SD-2)	0.07	OrthoFinder output from all 47 species
MA_10265740g0010	No alias	protein kinase (SD-2)	0.02	OrthoFinder output from all 47 species
MA_10426990g0010	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.02	OrthoFinder output from all 47 species
MA_323825g0010	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.03	OrthoFinder output from all 47 species
Msp_g24661	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006488	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Smo84427	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	OrthoFinder output from all 47 species
Solyc09g011330.3.1	Solyc09g011330	protein kinase (SD-2)	0.03	OrthoFinder output from all 47 species
Zm00001e002531_P001	Zm00001e002531	G-type lectin S-receptor-like serine/threonine-protein...	0.05	OrthoFinder output from all 47 species
Zm00001e028026_P001	Zm00001e028026	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008037	cell recognition	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048544	recognition of pollen	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000858	S_locus_glycoprot_dom	252	318
IPR001480	Bulb-type_lectin_dom	79	164
IPR000719	Prot_kinase_dom	518	800

External Links

No external refs found!

LOC_Os04g56080.1 (LOC_Os04g56080)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation