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  5. LOC_Os04g55700.1

LOC_Os04g55700.1 (SDN3, LOC_Os04g55700)


Aliases : SDN3, LOC_Os04g55700

Description : miRNA nuclease (SDN1)


Gene families : OG0005194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00040500 SDN3,... Small RNA degrading nuclease 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp1g15620.1 SDN1 miRNA nuclease (SDN1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 144 292
No external refs found!