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  5. LOC_Os04g55280.1

LOC_Os04g55280.1 (LOC_Os04g55280)


Aliases : LOC_Os04g55280

Description : no hits & (original description: none)


Gene families : OG0001308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55280.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g03393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01636.t2 Aspi01Gene01636 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01980.t1 Aspi01Gene01980 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0018.g014893 No alias not classified & original description: CDS=179-1423 0.04 OrthoFinder output from all 47 species
Ceric.13G027800.1 Ceric.13G027800 not classified & original description: pacid=50635022... 0.03 OrthoFinder output from all 47 species
Ceric.38G054300.1 Ceric.38G054300 not classified & original description: pacid=50580567... 0.03 OrthoFinder output from all 47 species
Dde_g22364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031385001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g08819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g12490.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023187 No alias not classified & original description: CDS=659-2785 0.02 OrthoFinder output from all 47 species
Sam_g35499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019225_P004 Zm00001e019225 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038447_P002 Zm00001e038447 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!