LOC_Os04g55180.1 (LOC_Os04g55180)


Aliases : LOC_Os04g55180

Description : no hits & (original description: none)


Gene families : OG0003005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55180.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00146170 evm_27.TU.AmTr_v1... No description available 0.13 OrthoFinder output from all 47 species
AT1G52510 No alias alpha/beta-Hydrolases superfamily protein 0.13 OrthoFinder output from all 47 species
AT4G12830 No alias alpha/beta-Hydrolases superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g001967 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g006305 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g10791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33412 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g17008 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g14958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36022 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene67459.t1 Aspi01Gene67459 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0590.g078724 No alias not classified & original description: CDS=122-673 0.06 OrthoFinder output from all 47 species
Cba_g32208 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.10G064900.1 Ceric.10G064900 not classified & original description: pacid=50613395... 0.05 OrthoFinder output from all 47 species
Ceric.31G023700.1 Ceric.31G023700 not classified & original description: pacid=50575026... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001155.5 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre03.g195200 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05957 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g07667 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14382 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g31770 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g25436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15514 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001533001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01017376001 No alias No description available 0.13 OrthoFinder output from all 47 species
Len_g02240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19748 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g03859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_199040g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_786978g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_873302g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp1g04750.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g16820.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g37507 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Msp_g39077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02735 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g34894 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g07911 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27055 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g12444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35074 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g01959 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007169 No alias not classified & original description: CDS=30-1280 0.03 OrthoFinder output from all 47 species
Sam_g17824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24579 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo235851 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc06g068220.3.1 Solyc06g068220 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc09g047900.2.1 Solyc09g047900 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Spa_g11921 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Tin_g00702 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g06884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e041772_P001 Zm00001e041772 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 140 385
No external refs found!