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  5. LOC_Os04g54900.1

LOC_Os04g54900.1 (KDR, LOC_Os04g54900)


Aliases : KDR, LOC_Os04g54900

Description : transcription factor (bHLH)


Gene families : OG0009654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54900.1

Target Alias Description ECC score Gene Family Method Actions
AT1G26945 KDR basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G74500 ATBS1, TMO7, BS1 activation-tagged BRI1(brassinosteroid-insensitive... 0.06 OrthoFinder output from all 47 species
AT3G47710 BNQ3, BHLH161 BANQUO 3 0.04 OrthoFinder output from all 47 species
AT5G15160 BNQ2, BHLH134 BANQUO 2 0.02 OrthoFinder output from all 47 species
GSVIVT01011380001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12210.1 LOC_Os06g12210 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os11g39000.1 ATBS1, TMO7,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_148495g0010 KDR transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_156285g0010 KDR transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_9119217g0010 KDR transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e000536_P001 KDR, Zm00001e000536 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 30 72
No external refs found!