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  5. LOC_Os04g54630.1

LOC_Os04g54630.1 (SEP2, LOC_Os04g54630)


Aliases : SEP2, LOC_Os04g54630

Description : SEP2 LHC-related protein


Gene families : OG0004142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54630.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Ehy_g05495 No alias light-responsive regulatory protein *(SEP2) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g14336 SEP2 light-responsive regulatory protein *(SEP2) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g12767 SEP2 light-responsive regulatory protein *(SEP2) & original... 0.02 OrthoFinder output from all 47 species
Smo443121 SEP2 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Spa_g05944 SEP2 light-responsive regulatory protein *(SEP2) & original... 0.05 OrthoFinder output from all 47 species
Spa_g42270 No alias light-responsive regulatory protein *(SEP2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 88 152
No external refs found!