1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g54360.1

LOC_Os04g54360.1 (LGT4, GAUT10, LOC_Os04g54360)


Aliases : LGT4, GAUT10, LOC_Os04g54360

Description : Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana (sp|q9skt6|gauta_arath : 645.0)


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54360.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00153190 GAUT11,... Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00110p00049110 GAUT13,... Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G54690 LGT6, GAUT12, IRX8 galacturonosyltransferase 12 0.02 OrthoFinder output from all 47 species
Adi_g011652 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Adi_g057965 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03259 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08627 LGT1, GAUT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14467 GAUT8, QUA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21091 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Als_g27771 GAUT8, QUA1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02297 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Aob_g29828 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60614.t1 GAUT8, QUA1,... glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Azfi_s0014.g013513 GAUT9 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g034009 GAUT13 not classified & original description: CDS=77-1654 0.02 OrthoFinder output from all 47 species
Cba_g71156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05728 GAUT11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g34317 GAUT13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04898 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Ehy_g08458 GAUT11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15665 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000800001 GAUT15 Probable galacturonosyltransferase 15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011500001 GAUT14 Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g21257 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21687 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07405 GAUT13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16101 LGT4, GAUT10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18277 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.05 OrthoFinder output from all 47 species
MA_130739g0010 GAUT4 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_131632g0010 LGT1, GAUT1 Polygalacturonate 4-alpha-galacturonosyltransferase... 0.03 OrthoFinder output from all 47 species
MA_5732482g0010 GAUT8, QUA1 Galacturonosyltransferase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_7999321g0010 GAUT8, QUA1 Galacturonosyltransferase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g02991 LGT4, GAUT10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04939 LGT1, GAUT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30078 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027082 LGT1, GAUT1 not classified & original description: CDS=704-3064 0.02 OrthoFinder output from all 47 species
Sam_g10373 No alias glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Sam_g12267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo141437 LGT1, GAUT1 Cell wall.pectin.homogalacturonan.synthesis.GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Solyc02g067060.3.1 GAUT13, Solyc02g067060 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g074650.2.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.07 OrthoFinder output from all 47 species
Zm00001e001553_P002 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species
Zm00001e010031_P002 GAUT4, Zm00001e010031 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e038254_P001 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 259 530
No external refs found!