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  5. LOC_Os04g54130.1

LOC_Os04g54130.1 (RK3, ARK3, LOC_Os04g54130)


Aliases : RK3, ARK3, LOC_Os04g54130

Description : protein kinase (SD-1)


Gene families : OG0033468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0033468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54130.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Zm00001e006835_P002 RK3, ARK3, Zm00001e006835 protein kinase (SD-1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
BP GO:0048544 recognition of pollen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 527 789
IPR000858 S_locus_glycoprot_dom 219 330
IPR003609 Pan_app 353 423
IPR001480 Bulb-type_lectin_dom 81 187
No external refs found!