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  5. LOC_Os04g53490.1

LOC_Os04g53490.1 (CHL, LOC_Os04g53490)


Aliases : CHL, LOC_Os04g53490

Description : LCNP non-photochemical quenching regulator lipocalin


Gene families : OG0007981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007981_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os04g53490.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00065360 CHL,... Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
AT3G47860 CHL chloroplastic lipocalin 0.03 OrthoFinder output from all 47 species
Aob_g04060 CHL regulatory protein lipocalin *(LCNP) of... 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046130 CHL regulatory protein lipocalin *(LCNP) of... 0.03 OrthoFinder output from all 47 species
Ceric.12G059300.1 CHL, Ceric.12G059300 regulatory protein lipocalin *(LCNP) of... 0.03 OrthoFinder output from all 47 species
Dcu_g51637 CHL regulatory protein lipocalin *(LCNP) of... 0.03 OrthoFinder output from all 47 species
GSVIVT01001999001 CHL Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Gb_16780 CHL LCNP non-photochemical quenching regulator lipocalin 0.03 OrthoFinder output from all 47 species
MA_11407g0010 CHL LCNP non-photochemical quenching regulator lipocalin 0.08 OrthoFinder output from all 47 species
Mp4g07530.1 CHL LCNP non-photochemical quenching regulator lipocalin 0.02 OrthoFinder output from all 47 species
Pnu_g14367 CHL regulatory protein lipocalin *(LCNP) of... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021654 CHL regulatory protein lipocalin *(LCNP) of... 0.07 OrthoFinder output from all 47 species
Sam_g15136 No alias regulatory protein lipocalin *(LCNP) of... 0.04 OrthoFinder output from all 47 species
Zm00001e006875_P002 CHL, Zm00001e006875 LCNP non-photochemical quenching regulator lipocalin 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 125 285
No external refs found!