LOC_Os04g53160.1 (LOC_Os04g53160)

Aliases : LOC_Os04g53160

Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum (sp|q7xa39|rga4_solbu : 270.0)

Gene families : OG0012625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012625_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g53160.1
Cluster	HCCA: Cluster_322

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os02g02640.1	LOC_Os02g02640	Putative disease resistance protein RGA3 OS=Solanum...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	312	539
IPR003656	Znf_BED	138	183
IPR041118	Rx_N	17	102

External Links

No external refs found!