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  5. LOC_Os04g52670.1

LOC_Os04g52670.1 (LOC_Os04g52670)


Aliases : LOC_Os04g52670

Description : no hits & (original description: none)


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52670.1

Target Alias Description ECC score Gene Family Method Actions
AT2G16580 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT3G20220 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT4G12410 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT5G42410 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
Aev_g17158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09109.t1 Aspi01Gene09109 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09110.t1 Aspi01Gene09110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25406.t1 Aspi01Gene25406 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42101.t1 Aspi01Gene42101 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53930.t1 Aspi01Gene53930 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G084900.1 Ceric.09G084900 not classified & original description: pacid=50587516... 0.03 OrthoFinder output from all 47 species
Dac_g22871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000929001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01015023001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01024127001 No alias Auxin-induced protein 15A OS=Glycine max 0.03 OrthoFinder output from all 47 species
Gb_02942 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_02944 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_12165 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_15664 No alias no description available(sp|q9sl45|sau10_arath : 98.6) 0.03 OrthoFinder output from all 47 species
Gb_29894 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_31036 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_39704 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g05050.1 LOC_Os02g05050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g56680.1 LOC_Os04g56680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10205229g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_119692g0010 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_138556g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_16245g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_195617g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_370618g0010 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_40406g0010 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_5864g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_66756g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_75867g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_91102g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_95364g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g21223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019893 No alias not classified & original description: CDS=1-909 0.02 OrthoFinder output from all 47 species
Solyc05g056440.3.1 Solyc05g056440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g15959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005213_P001 Zm00001e005213 Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e023802_P001 Zm00001e023802 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e030223_P001 Zm00001e030223 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037770_P001 Zm00001e037770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041661_P001 Zm00001e041661 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 163 232
No external refs found!