LOC_Os04g52440.1 (GABA-T, HER1, POP2,...)

Aliases : GABA-T, HER1, POP2, LOC_Os04g52440

Description : GABA pyruvate transaminase

Gene families : OG0004682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004682_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g52440.1
Cluster	HCCA: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01015821001	GABA-T, HER1, POP2	Amino acid metabolism.degradation.gamma-aminobutyrate...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008483	transaminase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016769	transferase activity, transferring nitrogenous groups	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005814	Aminotrans_3	65	479

External Links

No external refs found!