LOC_Os04g52330.1 (LOC_Os04g52330)


Aliases : LOC_Os04g52330

Description : no hits & (original description: none)


Gene families : OG0002005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52330.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g015190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18667 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g18668 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g01620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48017.t1 Aspi01Gene48017 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0529.g075796 No alias not classified & original description: CDS=57-1280 0.11 OrthoFinder output from all 47 species
Cba_g10474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G031300.1 Ceric.03G031300 not classified & original description: pacid=50572886... 0.04 OrthoFinder output from all 47 species
Ceric.07G081200.1 Ceric.07G081200 not classified & original description: pacid=50628006... 0.06 OrthoFinder output from all 47 species
Ceric.29G049700.1 Ceric.29G049700 not classified & original description: pacid=50624773... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000754.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre17.g731100 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g02820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036740001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_20661 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_930475g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g15120.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05550 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g07413 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10894 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g10895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17265 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03864 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006957_P001 Zm00001e006957 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e041633_P001 Zm00001e041633 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 93 203
No external refs found!