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  5. LOC_Os04g51280.1

LOC_Os04g51280.1 (LOC_Os04g51280)


Aliases : LOC_Os04g51280

Description : RNA editing factor (MORF)


Gene families : OG0008097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g51280.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00203580 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AT1G11430 No alias plastid developmental protein DAG, putative 0.11 OrthoFinder output from all 47 species
GSVIVT01014547001 No alias RNA processing.organelle machineries.RNA... 0.07 OrthoFinder output from all 47 species
GSVIVT01027872001 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Gb_32072 No alias RNA editing factor (MORF) 0.02 OrthoFinder output from all 47 species
Solyc02g079770.3.1 Solyc02g079770 RNA editing factor (MORF) 0.19 OrthoFinder output from all 47 species
Solyc05g054960.4.1 Solyc05g054960 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
Solyc06g008220.4.1 Solyc06g008220 RNA editing factor (MORF) 0.07 OrthoFinder output from all 47 species
Zm00001e040293_P001 Zm00001e040293 RNA editing factor (MORF) 0.1 OrthoFinder output from all 47 species
Zm00001e041577_P001 Zm00001e041577 RNA editing factor (MORF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!